Publikacje ICHB PAN

2024

• Damian M. Janecki, Raneet Sen, Natalia Szóstak, Arkadiusz Kajdasz, Martyna Kordyś,
  Kinga Plawgo, Dmytro Pandakov, Anna Philips, Zbigniew Warkocki , “LINE-1 mRNA 3′ end dynamics shape its biology and retrotransposition potential”, Nucleic Acids Research, 52,3327-3345, 2024. DO: I10.1093/nar/gkad1251
  
  
• Asli Esme, Dorota Kwiatek, Zbigniew Hnatejko, “Solvent effects on spectroscopic, electronic, and topological analyses, Hirshfeld surface, ADME, and molecular docking studies on antiviral pyridine carboxamide derivatives”, Journal of Molecular Liquids, 396,123940, 2024. DOI:10.1016/j.molliq.2023.123940
  
  
• Malwina Suszyńska, Magdalena Machowska, Eliza Fraszczyk, Maciej Michalczyk, Anna Philips, Paulina Gałka-Marciniak, Piotr Kozłowski, “CMC: Cancer miRNA Census – a list of cancer-related miRNA genes”, Nucleic Acids Research, 52, 1628-1644, 2024. DO:I10.1093/nar/gkae017
  
  
• Ewa Totoń, Natalia Lisiak, Aleksandra Romaniuk-Drapała, Grzegorz Framski, Eliza Wyszko, Tomasz Ostrowski, “Cytotoxic effects of kinetin riboside and its selected analogues on cancer cell lines”, Bioorganic & Medicinal Chemistry Letters, 100, art. nr 129628, 2024.
  DOI: 10.1016/j.bmcl.2024.129628
  
  
• Katarzyna Sutor-Świeży, Renata Górska, Agnieszka Kumorkiewicz-Jamro, Ewa Dziedzic, Monika Bieniasz, Przemysław Mielczarek, Łukasz Popenda, Karol Pasternak, Małgorzata Tyszka-Czochara, Monika Baj-Krzyworzeka, Monika Stefańska, Przemysław Błyszczuk, and Sławomir Wybraniec, “Basella alba L. (Malabar Spinach) as an Abundant Source of Betacyanins: Identification, Stability, and Bioactivity Studies on Natural and Processed Fruit Pigments”, Journal of Agricultural and Food Chemistry, 72, 2943-2962, 2024. DOI:10.1021/acs.jafc.3c06225
  
  
• Dominika Krygier, Mikołaj Przybyła, Marcin K. Chmielewski, “Microwave-Dependent Thermo-Release Approach for Oligonucleotides 5′-Phosphorylation”, Organic Letters, 26,1134-1137, 2024. DOI: 10.1021/acs.orglett.3c03924
  
  
• Joanna Watral, Dorota Formanowicz, Bartłomiej Perek, Katarzyna Kostka-Jeziorny, Alina Podkowińska, Andrzej Tykarski, Magdalena Łuczak, “Comprehensive proteomics of monocytes indicates oxidative imbalance functionally related to inflammatory response in chronic kidney disease-related atherosclerosis”, Frontiers in Molecular Biosciences, 11, art. nr 1229648, 2024. DOI: 10.3389/fmolb.2024.1229648
  
  
• Anna Wojakowska, Łukasz Marczak, Marcin Zeman, Mykola Chekan, Ewa Zembala-Nożyńska, Krzysztof Polański, Aleksander Strugała, Piotr Widlak, Monika Pietrowska, “Proteomic and metabolomic signatures of rectal tumor discriminate patients with different responses to preoperative radiotherapy”, Frontiers in Oncology, 14, art. nr 1323961, 2024. DOI: 10.3389/fonc.2024.1323961
  
  
• T. Krępski, A. Piasecka, M. Święcicka, M. Kańczurzewska, A. Sawikowska, M. Dmochowska-Boguta, M. Rakoczy-Trojanowska, M. Matuszkiewicz, “Leaf rust (Puccinia recondita f. sp. secalis) triggers substantial changes in rye (Secale cereale L.) at the transcriptome and metabolome levels”, BMC Plant Biology, 24, art. nr 107, 2024. DOI:10.1186/s12870-024-04726-0
  
  
• Monika Stachowiak, Joanna Nowacka-Woszuk, Alicja Szabelska-Beresewicz, Joanna Zyprych-Walczak, Paulina Krzemińska, Oskar Sosiński, Tomasz Nowak, Marek Świtoński, “A massive alteration of gene expression in undescended testicles of dogs and the association of KAT6A variants with cryptorchidism”, Proceedings of the National Academy of Sciences of the United States of America, 121, art. nr e2312724121, 2024. DOI:10.1073/pnas.2312724121
  
  
• Joanna Śliwiak, Paulina Worsztynowicz, Kinga Pokrywka, Joanna I. Loch, Marta Grzechowiak, Mariusz Jaskólski, “Biochemical characterization of L-asparaginase isoforms from Rhizobium etli—the boosting effect of zinc”, Frontiers in Chemistry, 12, art. nr 1373312, 2024. DOI: 10.3389/fchem.2024.1373312
  
  
• Adam A. Mieloch, Anna M. Mleczko, Anna Samelak-Czajka, Paulina Jackowiak, Jakub D. Rybka, “Biomimetic virus-like particles with magnetic core. From bioactivity to an immunodiagnostic tool”, Chemical Engineering Journal, 485, art. nr 149714, 2024. DOI:10.1016/j.cej.2024.149714
  
  
• Małgorzata Wojtkowska, Natalia Karczewska, Klaudia Pacewicz, Andrzej Pacak, Piot Kopeć, Jolanta Florczak-Wyspiańska, Karolina Popławska-Domaszewicz, Tomasz Małkiewicz, Bartosz Sokół, Tomasz Małkiewicz, Bartosz Sokół, “Quantification of Circulating Cell-Free DNA in Idiopathic Parkinson’s Disease Patients”, International Journal of Molecular Sciences, 25, art. nr 2818, 2024. DOI: 10.3390/ijms25052818
  
  
• Karolina Zimmer, Alicja M. Chmielewska, Paulina Jackowiak, Marek Figlerowicz, Krystyna Bienkowska-Szewczyk, “Alterations in N-glycosylation of HCV E2 Protein in Children Patients with IFN-RBV Therapy Failure”, Pathogens, 13, art. nr 256, 2024. DOI:10.3390/pathogens13030256
  
  
• Wojciech Witek, Joanna Śliwiak, Michał Rawski, Miłosz Ruszkowski, “ Targeting imidazole-glycerol phosphate dehydratase in plants: novel approach for structural and functional studies, and inhibitor blueprinting”, Frontiers in Plant Science, 15, art. nr 1343980, 2024. DOI: 10.3389/fpls.2024.1343980
  
  
• Anna M. Majewska, Mariola A. Dietrich, Lucyna Budźko, Mikołaj Adamek, Marek Figlerowicz, Andrzej Ciereszko, “Secreted novel AID/APOBEC-like deaminase 1 (SNAD1) – a new important player in fish immunology”, Frontiers in Immunology, 15, art. nr 1340273, 2024. DOI: 10.3389/fimmu.2024.1340273
  
  
• Natalia Szóstak, Luiza Handschuh, Anna Samelak-Czajka, Katarzyna Tomela, Bernadeta Pietrzak, Marcin Schmidt, Łukasz Galus, Jacek Mackiewicz, Andrzej Mackiewicz, Piotr Kozłowski, Anna Philips, “Gut Mycobiota Dysbiosis Is Associated with Melanoma and Response to Anti–PD-1 Therapy”, Cancer Immunology Research, 12, 427-439, 2024. DOI:10.1158/2326-6066.CIR-23-0592
  
  

2023

• P​aweł Śledziński, Agnieszka Nowak-Terpiłowska, Piotr Rzymski, Ryszard Słomski, Joanna Zeyland, “In Vitro Evidence of Selective Pro-Apoptotic Action of the Pure Cannabidiol and Cannabidiol-Rich Extract”, Molecules, 28, art nr 7887, 2023. DOI:10.3390/molecules28237887
  
  
• Lucyna Budźko, Karolina Hoffa-Sobiech, Paulina Jackowiak, Marek Figlerowicz, Engineered deaminases as a key component of DNA and RNA editing tools, Molecular Therapy. Nucleic Acids, 34, art nr 102062, 2023. DOI: 10.1016/j.omtn.2023.102062
  
  
• Sebastian Rykowski, Dorota Gurda-Woźna, Agnieszka Fedoruk-Wyszomirska, Marta
  Orlicka-Płocka , Aleksandra Kowalczyk, Paweł Stączek, Marta Denel-Bobrowska, Katarzyna Biniek-Antosiak, Wojciech Rypniewski, Eliza Wyszko, Agnieszka B. Olejniczak, “Carboranyl-1,8-naphthalimide intercalators induce lysosomal membrane permeabilization and
  ferroptosis in cancer cell lines”, Journal of Enzyme Inhibition and Medicinal Chemistry, 38, art nr 2171028, 2023. DOI:10.1080/14756366.2023.2171028
  
  
• Natalia Szóstak, Marek Figlerowicz, Anna Philips , “The emerging role of the gut mycobiome in liver diseases”, Gut Microbes, 15, art nr 2211922, 2023. DOI:10.1080/19490976.2023.2211922
  
  
• Karolina Kułak, Natalia Wojciechowska, Anna Samelak-Czajka, Paulina Jackowiak, Agnieszka Bagniewska-Zadworna, “How to explore what is hidden? A review of techniques for vascular tissue expression profile analysis”, Plant Methods, 19, art nr 129, 2023. DOI:10.1186/s13007-023-01109-8
  
  
• Nivedita Dutta, Joanna Sarzyńska, Indrajit Deb, Ansuman Lahiri, “Predicting nearest neighbor free energies of modified RNA with LIE: results for pseudouridine and N1-methylpseudouridine within RNA duplexes”, Physical Chemistry Chemical Physics, 26, 992-999, 2023. DOI: 10.1039/D3CP02442C
  
  
• Aitana Neves, Isabel Cuesta, Erik Hjerde, Terje Klemetsen, David Salgado, Jacques van Helden, Nadim Rahman, Nazeefa Fatima, Nestoras Karathanasis, Paweł Zmora, Wolmar Nyberg Åkerström, Sushma Nagaraja Grellscheid, Zahra Waheed, Niklas Blomberg, “FAIR+E pathogen data for surveillance and research: lessons from COVID-19”, Frontiers in Public Health, 11, art nr 1289945, 2023. DOI: 10.3389/fpubh.2023.1289945
  
  
• Agnieszka Żmieńko, Paweł Wojciechowski, Marek Figlerowicz, “Editorial: Resolving the complexity of plant genomes and transcriptomes with long reads, volume II”, Frontiers in Plant Science, 14, 2023. DOI: 10.3389/fpls.2023.1326500
  
  
• Jagoda Litowczenko, Jacek K. Wychowaniec, Karol Załęski, Łukasz Marczak, Charlotte J.C. Edwards-Gayle, Krzysztof Tadyszak, Barbara M. Maciejewska, “Micro/nano-patterns for enhancing differentiation of human neural stem cells and fabrication of nerve conduits via
  soft lithography and 3D printing”, Biomaterial Advances, 154, art nr 213653, 2023. DOI:10.1016/j.bioadv.2023.213653
  
  
• Marta Kazimierska, Marta Podralska, Magdalena Żurawek, Tomasz Woźniak, Marta Elżbieta Kasprzyk, Weronika Sura, Wojciech Łosiewski, Iwona Ziółkowska-Suchanek, Joost Kluiver, Anke van den Berg, Natalia Rozwadowska, Agnieszka Dzikiewicz-Krawczyk, “CRISPR/Cas9 screen for genome-wide interrogation of essential MYC-bound E-boxes in cancer cells”, Molecular Oncology, 17, 2295-2313, 2023. DOI:10.1002/1878-0261.13493
  
  
• Anna Syguda, Łukasz Ławniczak, Patrycja Wróbel, Filip Walkiewicz, Grzegorz Framski, Anna Parus, Marta Woźniak-Karczewska, Michał Niemczak, Aleksandra Gierka, Łukasz Chrzanowski, “Biodegradable amidequats, derivatives of caprylic and pelargonic acids as cationic surfactants for agricultural applications”, Journal of Molecular Liquids, 391, art nr 123221, 2023. DOI: 10.1016/j.molliq.2023.123221
  
  
• A. Pyrih, A. Łapiński, S. Zięba, A. Mizera, R. Lesyk, A. K. Gzella, M. Jaskólski, “Proton tautomerism and stereoisomerism in 5-[(dimethylamino)methylidene] -4-[3/4-(trifluoromethylphenyl)amino] -1,3-thiazol -2(5H)-ones: synthesis, crystal structure and
  spectroscopic studies”, Acta Crystallographica. Section C- Structural Chemistry, C79, 480-490, 2023. DOI: 10.1107/S2053229623009087
  
  
• Katarzyna Taylor, Agnieszka Piasecka, Arkadiusz Kajdasz, Aleksandra Brzęk, Micaela Polay Espinoza, Cyril F. Bourgeois, Artur Jankowski, Małgorzata Borowiak, Katarzyna D. Raczyńska, Łukasz J. Sznajder Krzysztof Sobczak, ” Modulatory role of RNA helicases in
  MBNL-dependent alternative splicing regulation”, Cellular and Molecular Life Sciences, 80, art nr 335, 2023. DOI: 10.1007/s00018-023-04927-0
  
  
• Carolina Roxo , Karolina Zielińska, Anna Pasternak, “Bispecific G-quadruplexes as inhibitors of cancer cells growth”, Biochimie, 214, 91-100, 2023. DOI:10.1016/j.biochi.2023.08.008
  
  
• Agnieszka Potęga, Dominika Rafalska, Dawid Kazimierczyk, Michał Kosno, Aleksandra Pawłowicz, Witold Andrałojć, Ewa Paluszkiewicz, Tomasz Laskowski, “In Vitro Enzyme Kinetics and NMR-Based Product Elucidation for Glutathione S-Conjugation of the Anticancer Unsymmetrical Bisacridine C-2028 in Liver Microsomes and Cytosol: Major Role of Glutathione S-Transferase M1-1 Isoenzyme”, Molecules, 28, art. nr 6812, 2023. DOI:10.3390/molecules28196812
  
  
• Andrii Pyrih, Andrzej Łapiński, Sylwia Zięba, Adam Mizera, Roman Lesyk, Andrzej K. Gzella, Mariusz Jaskólski, “Proton tautomerism and stereoisomerism in isomeric 4-(metoxyphenyl)amino-1,3-thiazol-2(5H)-one derivatives: Synthesis, crystal structure and spectroscopic studies”, Journal of Molecular Structure, 1295, art. nr 136748, 2023. DOI:10.1016/j.molstruc.2023.136748
  
  
• Dagmara Pietkiewicz, Mikołaj Piotr Zaborowski, Kamila Jaz, Eliza Matuszewska, Agata Światły-Błaszkiewicz, Tomasz Kluz, Zenon J. Kokot, Ewa Nowak-Markwitz, Jan Matysiak, “Serum Proteomic Profiles of Patients with High and Low Risk of Endometrial Cancer Recurrence”, 24, art. nr 14528, 2023. DOI: 10.3390/ijms241914528
  
  
• Bohdan Schneider, Blake A. Sweeney, Alex Bateman, Jiri Cerny, Tomasz Zok, Marta Szachniuk, “When will RNA get its AlphaFold moment?”, Nucleic Acids Research, 51, 9522-9532, 2023. DOI: 10.1093/nar/gkad726
  
  
• Prayas Chakrabarty, Raneet Sen, Sugopa Sengupta, “From parasites to partners: exploring the intricacies of host-transposon dynamics and coevolution”, Functional & Integrative Genomics, 23, art nr 278, 2023. DOI: 10.1007/s10142-023-01206-w
  
  
• Kamila Jaz, Cezary Miedziarek, Ewa Piasek, Artur Florek, Ewa Nowak-Markwitz, Mikołaj Piotr Zaborowski, „Choriocarcinoma complicated with intra-abdominal and intrapleural hemorrhage in pregnancy – case report”, Frontiers in Oncology, 13, art. nr 1198553, 2023. DOI: 10.3389/fonc.2023.1198553
  
  
• Amin Haghani, Caesar Z. Li, Todd R. Robeck, Joshua Zhang, Ake T. Lu, Julia Ablaeva, Victoria A. Acosta-Rodríguez, Danielle M, Abdulaziz N. Alagaili, Javier Almunia, Ajoy Aloysius, Nabil M.S. Amor, Reza Ardehali, Adriana Arneson, C. Scott Baker, Gareth Banks, Katherine Belov, Nigel C. Bennett, Peter Black, Daniel T. Blumstein, Eleanor K. Bors, Charles E. Breeze, Robert T. Brooke, Janine L. Brown, Gerald Carter, Alex Caulton, Julie M. Cavin, Lisa Chakrabarti, Ioulia Chatzistamou, Andreas S. Chavez, Hao Chen, Kaiyang Cheng, Priscila Chiavellini, Oi-Wa Choi, Shannon Clarke, Joseph A. Cook, Lisa N. Cooper, Marie-Laurence Cossette, Joanna Day, Joseph DeYoung, Stacy Dirocco, Christopher Dold, Jonathan L. Dunnum, Erin E. Ehmke, Candice K. Emmons, Stephan Emmrich, Ebru Erbay, Claire Erlacher-Reid, Chris G. Faulkes, Zhe Fei, Steven H. Ferguson, Carrie J. Finno, Jennifer E. Flower, Jean-Michel Gaillard, Eva Garde, Livia Gerber, Vadim N. Gladyshev, Rodolfo G. Goya, Matthew J Grant, Carla B. Green, M. Bradley Hanson, Daniel W. Hart, Martin Haulena, Kelsey Herrick, Andrew N. Hogan, Carolyn J. Hogg, Timothy A. Hore, Taosheng Huang, Juan Carlos Izpisua Belmonte, Anna J. Jasińska, Gareth Jones, Eve Jourdain, Olga Kashpur, Harold Katcher, Etsuko Katsumata, Vimala Kaza, Hippokratis Kiaris, Michael S. Kobor Pawel Kordowitzki, William R. Koski, Michael Krützen, Soo Bin Kwon, Brenda Larison, Sang-Goo Lee, Marianne Lehmann, Jean-François Lemaître, Andrew J. Levine, Xinmin Li, Cun Li, Andrea R. Lim, David T. S. Lin, Dana M. Lindemann, Schuyler W. Liphardt, Thomas J. Little, Nicholas Macoretta, Dewey Maddox, Craig O. Matkin, Julie A. Mattison, Matthew McClure, June Mergl, Jennifer J. Meudt, Gisele A. Montano, Khyobeni Mozhui, Jason Munshi-South, William J. Murphy, Asieh Naderi, Martina Nagy, Pritika Narayan,
  Peter W. Nathanielsz, Ngoc B. Nguyen, Christof Niehrs, Batsaikhan Nyamsuren, Justine K. O’Brien, Perrie O’Tierney Ginn, Duncan T Odom, Alexander G. Ophir, Steve Osborn, Elaine A. Ostrander, Kim M. Parsons, Kimberly C. Paul, Amy B. Pedersen, Matteo Pellegrini, Katharina J. Peters, Jessica L. Petersen, Darren W. Pietersen, Gabriela M. Pinho Jocelyn Plassais, Jesse R. Poganik, Natalia A. Prado, Pradeep Reddy, Benjamin Rey, Beate R. Ritz, Jooke Robbins, Magdalena Rodriguez, Jennifer Russell, Elena Rydkina, Lindsay L. Sailer, Adam B. Salmon, Akshay Sanghavi, Kyle M. Schachtschneider, Dennis Schmitt, Todd Schmitt, Lars Schomacher, Lawrence B. Schook, Karen E. Sears, Ashley W. Seifert, Aaron B.A. Shafer, Anastasia V. Shindyapina, Melanie Simmons, Kavita Singh, Ishani Sinha, Jesse Slone, Russel G. Snell, Elham Soltanmohammadi, Matthew L. Spangler, Maria Spriggs, Lydia Staggs, Nancy Stedman, Karen J. Steinman, Donald T Stewart, Victoria J. Sugrue,
  Balazs Szladovits, Joseph S. Takahashi, Masaki Takasugi, Emma C. Teeling, Michael J. Thompson, Bill Van Bonn, Sonja C. Vernes, Diego Villar, Harry V. Vinters, Ha Vu, Mary C. Wallingford, Nan Wang, Gerald S. Wilkinson, Robert W. Williams, Qi Yan, Mingjia Yao, Brent G. Young, Bohan Zhang, Zhihui Zhang, Yang Zhao, Peng Zhao, Wanding Zhou, Joseph A. Zoller, Jason Ernst, Andrei Seluanov, Vera Gorbunova, X. William Yang, Ken Raj, Steve Horvath, “DNA methylation networks underlying mammalian traits”, Science, 381, 647, 2023 DOI: 10.1126/science.abq5693
  
  
• Kamila Jaz, Cezary Miedziarek, Ewa Piasek, Artur Florek, Ewa Nowak-Markwitz, Mikołaj Piotr Zaborowski, “Choriocarcinoma complicated with intra-abdominal and intrapleural hemorrhage in pregnancy – case report”, Frontiers in Oncology, 13, 2023. DOI: 10.3389/fonc.2023.1198553
  
  
• Francisco Carrascoza, Piotr Łukasiak, Wiesław Nowak, Jacek Błażewicz, “Ab Initio Study of Glycine Formation in the Condensed Phase: Carbon Monoxide, Formaldimine, and Water Are Enough”, Astrophysical Journal, 956, art. nr 140, 2023. DOI: 10.3847/1538-4357/acea5b
  
  
• Jolanta Brzezińska, Stanisław Trzciński, Joanna Strzelec, Marcin K. Chmielewski, „From CPG to hybrid support: Review on the approaches in nucleic acids synthesis in various media”, Bioorganic Chemistry, 140, art. nr 106806, 2023. DOI:10.1016/j.bioorg.2023.106806
  
  
• Natalia Iżycka, Mikołaj Piotr Zaborowski, Łukasz Ciecierski, Kamila Jaz, Sebastian Szubert, Cezary Miedziarek, Marta Rezler, Kinga Piątek-Bajan, Aneta Synakiewicz, Anna Jankowska, Marek Figlerowicz, Karolina Sterzyńska, Ewa Nowak-Markwitz, „Cancer Stem Cell Markers—Clinical Relevance and Prognostic Value in High-Grade Serous Ovarian Cancer (HGSOC) Based on The Cancer Genome Atlas Analysis”, International Journal of Molecular Sciences, 24, art. nr 12746, 2023. DOI: 10.3390/ijms241612746
  
  
• Joanna I. Loch, Paulina Worsztynowicz, Joanna Śliwiak, Marta Grzechowiak, Barbara Imiołczyk, Kinga Pokrywka, Mateusz Chwastyk, Mirosław Gilski, Mariusz Jaskólski, “Rhizobium etli has two L-asparaginases with low sequence identity but similar structure and catalytic center”, Acta Crystallographica Section D-Structural Biology, D79, 775-791, 2023. DOI: 10.1107/S2059798323005648
  
  
• Monika Gazecka, Jakub Śnieżek, Krzysztof Maciołek, Arleta Kowala-Piaskowska, Paweł Zmora, “Mpox virus detection in the wastewater and the number of hospitalized patients in the Poznan metropolitan area, Poland”, International Journal of Infectious Diseases, 133, 75-77, 2023. DOI: 10.1016/j.ijid.2023.05.014
  
  
• Anna Golczak, Dorota Prukała, Ewa Sikorska, Mateusz Gierszewski, Volodymyr Cherkas, Dorota Kwiatek, Adam Kubiak, Naisargi Varma, Tomasz Pędziński, Shaun Murphree, Radek Cibulka, Lucyna Mrówczyńska, Jacek Łukasz Kolanowski, Marek Sikorski, „Tetramethylalloxazines as efficient singlet oxygen photosensitizers and potential redox-sensitive agents”,Scientific Reports, art. nr 13426,2023. DOI: 10.1038/s41598-023-40536-4
  
  
• Marta Grzechowiak, Joanna Śliwiak, Mariusz Jaskólski, Miłosz Ruszkowski, „Structural and functional studies of Arabidopsis thaliana glutamate dehydrogenase isoform 2 demonstrate enzyme dynamics and identify its calcium binding site”, Plant Physiology and Biochemistry, 201, art. nr 107895, 2023. DOI: 10.1016/j.plaphy.2023.107895
  
  
• Ireneusz Stolarek, Michał Zeńczak, Luiza Handschuh, Anna Juras, Małgorzata Marcinkowska-Swojak, Anna Spinek, Artur Dębski, Marzena Matla, Hanna Kóčka-Krenz, Janusz Piontek, Polish Archaeogenomics Consortium Team, Marek Figlerowicz, „Genetic
  history of East-Central Europe in the first millennium CE”, Genome Biology, 24, art. nr 173, 2023. DOI: 10.1186/s13059-023-03013-9
  
  
• Agnieszka Hryniewiecka, Joanna Breczko, Gabriela Siemaszko, Anthony N. Papathanassiou, Kinga Góra-Marek, Karolina A. Tarach, Krzysztof Brzezinski, Anna Ilnicka, Artur P. Terzyk, Karolina H. Markiewicz, Luis Echegoyen, Marta E. Płońska-Brzezińska, „Three-dimensional organization of pyrrolo[3,2-b]pyrrole-based triazine framework using nanostructural spherical carbon: enhancing electrochemical performance of materials for supercapacitors”, Scientific Reports, 12, art. nr 10737, 2023. DOI: 10.1038/s41598-023-37708-7
  
  
• Anna Samelak-Czajka, Paweł Wojciechowski, Małgorzata Marszałek-Zeńczak, Marek Figlerowicz, Agnieszka Żmieńko, „Differences in the intraspecies copy number variation of Arabidopsis thaliana conserved and nonconserved miRNA genes”, Functional & Integrative Genomics, 23, art. nr 120, 2023. DOI: 10.1007/s10142-023-01043-x
  
  
• Satenik Mkrtchyan, Michał Jakubczyk, Šimon Budzák, Barbora Benická, Viktor O. Iaroshenko, „Introducing Trifluoromethoxyarenes as Halide Surrogates in Mechanochemical Realizations of Ni-catalyzed Cross-coupling Reactions”, Asian Journal of Organic Chemistry, 12, 2023. DOI: 10.1093/nar/gkad346
  
  
• Monika Piwecka, Nikolaus Rajewsky, Agnieszka Rybak-Wolf, „Single-cell and spatial transcriptomics: deciphering brain complexity in health and disease”, Nature Reviews Neurology, 19, 346-362, 2023. DOI: 10.1038/s41582-023-00809-y
  
  
• Praveen Awasthi, Ajay Kumar Mishra, Tomáš Kocábek, Vishnu Sukumari Nath, Sagarika Mishra, Khaled M. Hazzouri, Naganeeswaran Sudalaimuthuasari, Natasa Stajner, Jernej Jakše, Karel Krofta, Tomáš Hájek, Khaled MA. Amiri, „CRISPR/Cas9-mediated mutagenesis of the mediator complex subunits MED5a and MED5b genes impaired secondary metabolite accumulation in hop (Humulus lupulus)”, Plant Physiology and Biochemistry, 201, art. nr 107851, 2023. DOI: 10.1016/j.plaphy.2023.107851
  
  
• A. Fiszer, „All roads lead to cure: Diversity of oligonucleotides in DM1 therapy”, Molecular Therapy. Nucleic Acids, 32, 898-899, 2023. DOI: 10.1016/j.omtn.2023.05.012
  
  
• Monika Piwecka, Raphaelle Luisier, Catia Andreassi, „Editorial: RNA at a breaking point? Cytoplasmic cleavage and other post-transcriptional RNA processing in neurodevelopment and disease”, Frontiers in Molecular Neuroscience, 16, art. nr 1214853, 2023. DOI: 10.3389/fnmol.2023.1214853
  
  
• A. Pyrih, A. Łapiński, S. Zięba, A. Mizera, R. Lesyk, M. Jaskólski, K. Gzella, „Proton tautomerism in 5-dimethylaminomethylidene -4-(o-,m-,p-hydroxyphenyl)amino -1,3- thiazol -2(5H)-ones: synthesis, crystal structure and spectroscopic studies ”, Acta Crystallographica B- Sctructural Science, Crystal Engineering and Materials, B79, 220-232, 2023. DOI: 10.1107/S2052520623003852
  
  
• Maciej Janicki, Anna Ściuk, Andrzej Zieleziński, Miłosz Ruszkowski, Agnieszka Ludwików, Wojciech M. Karłowski, Mariusz Jaskólski, Joanna I. Loch, „The effects of nature-inspired amino acid substitutions on structural and biochemical properties of the E. coli L-asparaginase EcAIII”, Protein Science, 32, art. nr e4647, 2023. DOI: /10.1002/pro.4647
  
  
• Michał Żurkowski, Maciej Antczak, Marta Szachniuk, „High-quality, customizable heuristics for RNA 3D structure alignment”, Bioinformatics, 39, art. nr btad315, 2023. DOI: 10.1093/bioinformatics/btad315
  
  
• Barbara Mirska, Tomasz Woźniak, Dagny Lorent, Agnieszka Ruszkowska, Jake M. Peterson, Walter N. Moss, David H. Mathews, Ryszard Kierzek, Elżbieta Kierzek, „In vivo secondary structural analysis of Influenza A virus genomic RNA”, Cellular and Molecular Life Sciences, 80, 136, 2023. DOI: 10.1007/s00018-023-04764-1
  
  
• Bartosz Adamczyk, Michał Żurkowski, Marta Szachniuk, Tomasz Żok, “WebTetrado: a webserver to explore quadruplexes in nucleic acid 3D structures”, Nucleic Acids Research, 51, W607- W612, 2023. DOI: 10.1093/nar/gkad346
  
  
• Agnieszka Kiliszek, Wojciech Rypniewski, Leszek Błaszczyk, „Exploring structural determinants and the role of nucleolin in formation of the long-range interactions between untranslated regions of p53 mRNA”, RNA, 29, 630-643, 2023. DOI: 10.1261/rna.079378.122
  
  
• Tomasz Ostrowski, „Bioactive Furanyl- or Thienyl-Substituted Nucleobases, Nucleosides and Their Analogues”, Mini-Reviews in Medicinal Chemistry, 23, 633-650, 2023. DOI: 10.2174/1389557522666220812125205
  
  
• Anna M. Barciszewska, Agnieszka Belter, Iwona Gawrońska, Magłorzata Giel-Pietraszuk, Mirosława Z. Naskręt-Barciszewska, „Juglone in Combination with Temozolomide Shows a Promising Epigenetic Therapeutic Effect on the Glioblastoma Cell Line”, International Journal of Molecular Sciences, 24, art. nr 6998, 2023. DOI: 10.3390/ijms24086998
  
  
• Bibek Aryal, Jian Xia, Zehan Hu, Michael Stumpe, Tashi Tsering, Jie Liu, John Huynh, Yoichiro Fukao, Nina Glöckner, Hsin-Yao Huang, Gloria Sáncho-Andrés, Konrad Pakuła, Joerg Ziegler, Karin Gorzolka, Marta Zwiewka, Tomasz Nodzyński, Klaus Harter, Clara Sánchez-Rodríguez, Michał Jasiński, Sabine Rosahl, Markus M. Geisler, „An LRR receptor kinase controls ABC transporter substrate preferences during plant growth-defense decisions”, Current Biology, 33, 2008-2023.e8, 2023. DOI: 10.1016/j.cub.2023.04.029
  
  
• Aleksandra Marchwicka, Kuba Nowak, Anastasiia Satyr, Dariusz Wołowiec, Ewa Marcinkowska, „Immuno-Stimulating Activity of 1,25-Dihydroxyvitamin D in Blood Cells from Five Healthy People and in Blasts from Five Patients with Leukemias and Pre- Leukemic States”, International JouNowicka-rnal of Molecular Sciences, 24, art. nr 6504, 2023. DOI: 10.3390/ijms24076504
  
  
• Konrad Pakuła, Carlos Sequeiros-Borja, Wanda Biała-Leonhard, Aleksandra Pawela, Joanna Banasiak, Aurelien Bailly, Marcin Radom, Markus Geisler, Jan Brezovsky, Michał Jasiński, „Restriction of access to the central cavity is a major contributor to substrate selectivity in plant ABCG transporters”, 80, art. nr 105, 2023. DOI: 10.1007/s00018-023-04751-6
  
  
• Magdalena Grajzer, Benita Wiatrak, Paulina Jawien, Łukasz Marczak, Anna Wojakowska, Rafał Wiejak, Edward Roj, Wojciech Grzebieluch, Anna Prescha, Evaluation of Recovery Methods for Fragaria vesca L. Oil: Characteristics, Stability and Bioactive Potential, Foods, 12, art. nr 1852, 2023. DOI: 10.3390/foods12091852
  
  
• Katarzyna Woźniak, Krzysztof Brzeziński, „Biological Catalysis and Information Storage Have Relied on N-Glycosyl Derivatives of β-D-Ribofuranose since the Origins of Life”, Biomolecules, 13, art. nr 782, 2023. DOI: 10.3390/biom13050782
  
  
• Bartosz Nowak, Emilia Kozłowska, Weronika Pawlik, Agnieszka Fiszer, „Atrophin-1 Function and Dysfunction in Dentatorubral–Pallidoluysian Atrophy”, Movement Disorders, 38, 526-536, 2023. DOI: 10.1002/mds.29355
  
  
• lkin Aygun, Alicja Rzepczak, Takashi S. Miki, „A germline-targeted genetic screen for xrn-2 suppressors identifies a novel gene C34C12.2 in Caenorhabditis elegans”, Genetics and Molecular Biology, 46, art. nr e20220328, 2023. DOI: 10.1590/1678-4685-GMB-2022-0328
  
  
• Maciej Piernik, Dariusz Brzeziński, Paweł Zawadzki, „Random Similarity Forests”, Machine Learning and Knowledge Discovery in Databases, 13717, 53-69, 2023. DOI: 10.1007/978-3-031-26419-1_4
  
  
• Piotr Piasecki, Kalina Wiatr, Miłosz Ruszkowski, Łukasz Marczak, Yvon Trottier, Maciej Figiel, „Impaired interactions of ataxin-3 with protein complexes reveals their specific structure and functions in SCA3 Ki150 model”, Frontiers in Molecular Neuroscience, 16, art. nr 1122308, 2023. DOI: 10.3389/fnmol.2023.1122308
  
  
• Monika Piwecka, Agnieszka Fiszer, Katarzyna Rolle, Marta Olejniczak, „RNA regulation in brain function and disease 2022 (NeuroRNA): A conference report”, Frontiers in Molecular Neuroscience, 16, art. nr 1133209, 2023. DOI: 10.3389/fnmol.2023.1133209
  
  
• Dorota Wronka, Anna Karlik, Julia O. Misiorek, Łukasz Przybył, „What the Gut Tells the Brain—Is There a Link between Microbiota and Huntington’s Disease?”, International Journal of Molecular Sciences, 24, art. nr 4477, 2023. DOI: 10.3390/ijms24054477
  
  
• Maria Rutkiewicz, Isabel Nogues, Wojciech Witek, Sebastiana Angelaccio, Roberto Cotestabile, Miłosz Ruszkowski, „Insights into the substrate specificity, structure, and dynamics of plant histidinol-phosphate aminotransferase (HISN6)”, Plant Physiology and Biochemistry, 196, 759-773, 2023. DOI: 10.1016/j.plaphy.2023.02.017
  
  
• Amanda Pacholak, Joanna Żur-Pińska, Artur Piński, Quynh Anh Nguyen, Marta Ligaj, Magdalena Łuczak, Long D. Nghiem, Ewa Kaczorek, „ Potential negative effect of long-term exposure to nitrofurans on bacteria isolated from wastewater”, 872, art. nr 162199, 2023. DOI: 10.1016/j.scitotenv.2023.162199
  
  
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